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Anaerobes
Fungi / Yeasts
Gram Positive
Gram Negative

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Scientific Publications - Anaerobes

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Gram postitive cocci Isolate Test Samples Gene Specificity Sensitivity Reference
AnaerococcusA. prevotiiOligonucleotide Arrayreference microorganismsApre4 / Apre591.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
AnaerococcusA. tetradiusOligonucleotide Arrayreference microorganismsApre4 / Apre591.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. fragilisDNA-based microarray (Prove-It Sepsis Assay)blood culturegyrB, parE, mecA98.80%94.70%Accurate and rapid identification of bacterial species from positive blood cultures with a DNA-based microarray platform: an observational study, Päi Tissari et al., Lancet 2010; 375: 224-32
BacteroidesB. vulgatusDNA-based microarray (Prove-It Sepsis Assay)blood culturegyrB, parE, mecA98.80%94.70%Accurate and rapid identification of bacterial species from positive blood cultures with a DNA-based microarray platform: an observational study, Päi Tissari et al., Lancet 2010; 375: 224-59
BacteroidesB. fragilisOligonucleotide Arrayreference microorganismsBfra8-1/Bfra18R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. ovatusOligonucleotide Arrayreference microorganismsBova491.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. thetaiotaomicronOligonucleotide Arrayreference microorganismsBthe991.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. uniformisOligonucleotide Arrayreference microorganismsBuni191.70%100%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. ureolyticusOligonucleotide Arrayreference microorganismsBure2-391.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
BacteroidesB. vulgatusOligonucleotide Arrayreference microorganismsBvul291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ClostridiumC. perfringensDNA-based microarray (Prove-It Sepsis Assay)blood culturegyrB, parE, mecA98.80%94.70%Accurate and rapid identification of bacterial species from positive blood cultures with a DNA-based microarray platform: an observational study, Päi Tissari et al., Lancet 2010; 375: 224-43
ClostridiumC. difficileRT-PCR LUMCcultureTcdB88.00%96.00%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49, No. 1, p. 227-231
ClostridiumC. difficileRT-PCR LvIcultureTcdA89.40%100.00%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49, No. 1, p. 227-231
ClostridiumC. difficileRT-PCR LvIcultureTcdB89.40%100.00%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49, No. 1, p. 227-231
ClostridiumC. difficileRT- PCR 117 PCRcultureTcdC90.70%98.00%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49, No. 1, p. 227-231
ClostridiumC. difficileRT-PCR AllculturePhHV96.90%88.30%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49, No. 1, p. 227-231
ClostridiumC. difficileEnzyme immunoassays (A/B-EIA)fecestoxin A/B100.00%69.60%C. Diff Quik Chek Complete Enzyme Immunoassay Provides a Reliable First-Line Method for Detection of Clostridium difficile in Stool Specimens, Criziel D. Quinn, JOURNAL OF CLINICAL MICROBIOLOGY, Feb. 2010, Vol. 48,No. 2, p. 603-605. N.B. Hands on time = 20 minutes / test turnaround time = 55 minutes.
ClostridiumC. difficileDiff Quik Chek Complete dual-antigen EIA (D-EIA)fecesGDH / toxin A/B100.00%78.30%C. Diff Quik Chek Complete Enzyme Immunoassay Provides a Reliable First-Line Method for Detection of Clostridium difficile in Stool Specimens, Criziel D. Quinn, JOURNAL OF CLINICAL MICROBIOLOGY, Feb. 2010, Vol. 48,No. 2, p. 603-605. N.B. Hands on time = 35 minutes / test turnaround time = 50 minutes.
ClostridiumC. difficileToxigenic culturefecesCulture98.30%91.30%C. Diff Quik Chek Complete Enzyme Immunoassay Provides a Reliable First-Line Method for Detection of Clostridium difficile in Stool Specimens, Criziel D. Quinn, JOURNAL OF CLINICAL MICROBIOLOGY, Feb. 2010, Vol. 48,No. 2, p. 603-605. N.B. Hands on time = 45 minutes / test turnaround time = 7200 minutes.
ClostridiumC. difficileBD-PCRfecesGene toxin B100.00%95.70%C. Diff Quik Chek Complete Enzyme Immunoassay Provides a Reliable First-Line Method for Detection of Clostridium difficile in Stool Specimens, Criziel D. Quinn, JOURNAL OF CLINICAL MICROBIOLOGY, Feb. 2010, Vol. 48,No. 2, p. 603-605. N.B. Hands on time = 60 minutes / test turnaround time = 130 minutes.
ClostridiumC. difficileLD-PCRfecestcdC gene96.70%91.30%C. Diff Quik Chek Complete Enzyme Immunoassay Provides a Reliable First-Line Method for Detection of Clostridium difficile in Stool Specimens, Criziel D. Quinn, JOURNAL OF CLINICAL MICROBIOLOGY, Feb. 2010, Vol. 48,No. 2, p. 603-605. N.B. Hands on time = 60 minutes / test turnaround time = 1640 minutes.
ClostridiumC. difficileReal Time PCRcultureTcdB98.20%83.60%Comparison of Real-Time PCR Techniques to Cytotoxigenic Culture Methods for Diagnosing Clostridium difficile Infection, C. W. Knetsch, JOURNAL OF CLINICAL MICROBIOLOGY, Jan. 2011, Vol. 49,No. 1, p. 227-231
ClostridiumC. bifermentansOligonucleotide Arrayreference microorganismsCbif3-191.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ClostridiumC. perfringensOligonucleotide Arrayreference microorganismsCper2-291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ClostridiumC. difficileOligonucleotide Arrayreference microorganismsCdif191.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ClostridiumC. septicumOligonucleotide Arrayreference microorganismsCsep491.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
FinegoldiaF. magnaOligonucleotide Arrayreference microorganismsFmag1 / Fmag4-1R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
FusobacteriumF. necrophorumOligonucleotide Arrayreference microorganismsFnec1-291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
FusobacteriumF. nucleatumOligonucleotide Arrayreference microorganismsFnuc6R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
FusobacteriumF. variumOligonucleotide Arrayreference microorganismsFvar391.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ParabacteroidesP. distasonisOligonucleotide Arrayreference microorganismsPdis791.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
ParvimonasP. micraOligonucleotide Arrayreference microorganismsPmic191.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PeptoniphilusP. asaccharolyticusOligonucleotide Arrayreference microorganismsPasa1-2 / Pasa3-1R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PeptostreptococcusP. anaerobiusOligonucleotide Arrayreference microorganismsPana391.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PorphyromonasP. asaccharolyticaOligonucleotide Arrayreference microorganismsPoasa2-1R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PorphyromonasP. gingivalisOligonucleotide Arrayreference microorganismsPgin291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PrevotellaP. intermediaOligonucleotide Arrayreference microorganismsPint2-291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PrevotellaP. melaninogenicaOligonucleotide Arrayreference microorganismsPmel2R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PropionibacteriumP. propionicusOligonucleotide Arrayreference microorganismsPpro1-191.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PropionibacteriumP. acnesOligonucleotide Arrayreference microorganismsPacn4-2 / Pacn8-291.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
PropionibacteriumP. granulosumOligonucleotide Arrayreference microorganismsPgra1-191.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
VeillonellaV. spp.Oligonucleotide Arrayreference microorganismsVpar1R91.70%99.70%Identification of Clinically Important Anaerobic Bacteria by an Oligonucleotide Array, Yu Tzu Lin. JOURNAL OF CLINICAL MICROBIOLOGY, Apr. 2010, Vol. 48,No. 4, p. 1283-1290
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